Publications

Mayr, CH, Simon, LM, Leuschner, G, Ansari, M, Schniering, J, Geyer, PE et al.. Integrative analysis of cell state changes in lung fibrosis with peripheral protein biomarkers. EMBO Mol Med. 2021; :e12871. doi: 10.15252/emmm.202012871. PubMed PMID:33650774 .

Velten, L, Story, BA, Hernández-Malmierca, P, Raffel, S, Leonce, DR, Milbank, J et al.. Identification of leukemic and pre-leukemic stem cells by clonal tracking from single-cell transcriptomics. Nat Commun. 2021;12 (1):1366. doi: 10.1038/s41467-021-21650-1. PubMed PMID:33649320 .

Llamazares Prada, M, Espinet, E, Mijošek, V, Schwartz, U, Lutsik, P, Tamas, R et al.. Versatile workflow for cell-type resolved transcriptional and epigenetic profiles from cryopreserved human lung. JCI Insight. 2021; :. doi: 10.1172/jci.insight.140443. PubMed PMID:33630765 .

Schirmer, L, Schafer, DP, Bartels, T, Rowitch, DH, Calabresi, PA. Diversity and Function of Glial Cell Types in Multiple Sclerosis. Trends Immunol. 2021;42 (3):228-247. doi: 10.1016/j.it.2021.01.005. PubMed PMID:33593693 PubMed Central PMC7914214.

Kälin, RE, Cai, L, Li, Y, Zhao, D, Zhang, H, Cheng, J et al.. TAMEP are brain tumor parenchymal cells controlling neoplastic angiogenesis and progression. Cell Syst. 2021; :. doi: 10.1016/j.cels.2021.01.002. PubMed PMID:33592194 .

Woo, MS, Ufer, F, Rothammer, N, Di Liberto, G, Binkle, L, Haferkamp, U et al.. Neuronal metabotropic glutamate receptor 8 protects against neurodegeneration in CNS inflammation. J Exp Med. 2021;218 (5):. doi: 10.1084/jem.20201290. PubMed PMID:33661276 .

Cuntz, F, Deubzer, HE, Schulte, JH, Nimtz-Talaska, A, Eggert, A, Holzhauer, S et al.. Hemostatic Management in an Infant With Neuroblastoma and Severe Hemophilia B With Extended Half-life Recombinant Factor IX Fusion Protein. J Pediatr Hematol Oncol. 2021; :. doi: 10.1097/MPH.0000000000002109. PubMed PMID:33661164 .

Baumgarten, N, Schmidt, F, Wegner, M, Hebel, M, Kaulich, M, Schulz, MH et al.. Computational prediction of CRISPR-impaired non-coding regulatory regions. Biol Chem. 2021; :. doi: 10.1515/hsz-2020-0392. PubMed PMID:33660495 .

Tegtmeyer, B, Vieyres, G, Todt, D, Lauber, C, Ginkel, C, Engelmann, M et al.. Initial HCV infection of adult hepatocytes triggers a temporally structured transcriptional program containing diverse pro- and anti-viral elements. J Virol. 2021; :. doi: 10.1128/JVI.00245-21. PubMed PMID:33658347 .

Green, AG, Elhabashy, H, Brock, KP, Maddamsetti, R, Kohlbacher, O, Marks, DS et al.. Large-scale discovery of protein interactions at residue resolution using co-evolution calculated from genomic sequences. Nat Commun. 2021;12 (1):1396. doi: 10.1038/s41467-021-21636-z. PubMed PMID:33654096 .

Vistain, LF, Tay, S. Single-Cell Proteomics. Trends Biochem Sci. 2021; :. doi: 10.1016/j.tibs.2021.01.013. PubMed PMID:33653632 .

Zhang, Y, Wang, D, Peng, M, Tang, L, Ouyang, J, Xiong, F et al.. Single-cell RNA sequencing in cancer research. J Exp Clin Cancer Res. 2021;40 (1):81. doi: 10.1186/s13046-021-01874-1. PubMed PMID:33648534 .

Wu, M, Xia, M, Li, W, Li, H. Single-Cell Sequencing Applications in the Inner Ear. Front Cell Dev Biol. 2021;9 :637779. doi: 10.3389/fcell.2021.637779. PubMed PMID:33644075 PubMed Central PMC7907461.

Royston, D, Mead, AJ, Psaila, B. Application of Single-Cell Approaches to Study Myeloproliferative Neoplasm Biology. Hematol Oncol Clin North Am. 2021;35 (2):279-293. doi: 10.1016/j.hoc.2021.01.002. PubMed PMID:33641869 .

Hang, X, He, S, Dong, Z, Minnick, G, Rosenbohm, J, Chen, Z et al.. Nanosensors for single cell mechanical interrogation. Biosens Bioelectron. 2021;179 :113086. doi: 10.1016/j.bios.2021.113086. PubMed PMID:33636499 .

Kong, R, Sun, Q, Cheng, S, Fu, J, Liu, W, Letcher, RJ et al.. Uptake, excretion and toxicity of titanate nanotubes in three stains of free-living ciliates of the genus Tetrahymena. Aquat Toxicol. 2021;233 :105790. doi: 10.1016/j.aquatox.2021.105790. PubMed PMID:33662879 .

Lee, H, Yi, SY, Kwon, JS, Choi, JM, Lee, DS, Lee, SH et al.. Rapid and highly sensitive pathogen detection by real-time DNA monitoring using a nanogap impedimetric sensor with recombinase polymerase amplification. Biosens Bioelectron. 2021;179 :113042. doi: 10.1016/j.bios.2021.113042. PubMed PMID:33662816 .

Wei, J, Zhou, T, Zhang, X, Tian, T. DTFLOW: Inference and Visualization of Single-cell Pseudotime Trajectory Using Diffusion Propagation. Genomics Proteomics Bioinformatics. 2021; :. doi: 10.1016/j.gpb.2020.08.003. PubMed PMID:33662626 .

Wang, X, He, Y, Zhang, Q, Ren, X, Zhang, Z. Direct Comparative Analyses of 10X Genomics Chromium and Smart-seq2. Genomics Proteomics Bioinformatics. 2021; :. doi: 10.1016/j.gpb.2020.02.005. PubMed PMID:33662621 .

Das, S, Rai, SN. SwarnSeq: An improved statistical approach for differential expression analysis of single-cell RNA-seq data. Genomics. 2021; :. doi: 10.1016/j.ygeno.2021.02.014. PubMed PMID:33662531 .