Tan, L., Fichtner, A. S., Bruni, E., Odak, I., Sandrock, I., Bubke, A., Borchers, A., Schultze-Florey, C., Koenecke, C., Förster, R., Jarek, M., von Kaisenberg, C., Schulz, A., Chu, X., Zhang, B., Li, Y., Panzer, U., Krebs, C. F., Ravens, S., & Prinz, I. (2021). A fetal wave of human type 3 effector γδ cells with restricted TCR diversity persists into adulthood. Science immunology, 6(58), eabf0125. https://doi.org/10.1126/sciimmunol.abf0125
Xu, X., Smaczniak, C., Muino, J. M., & Kaufmann, K. (2021). Cell identity specification in plants: lessons from flower development. Journal of experimental botany, erab110. Advance online publication. https://doi.org/10.1093/jxb/erab110
Schouten, J., Matek, C., Jacobs, L., Buck, M. C., Bošnački, D., & Marr, C. (2021). Tens of images can suffice to train neural networks for malignant leukocyte detection. Scientific reports, 11(1), 7995. https://doi.org/10.1038/s41598-021-86995-5
Albert, T. K., Interlandi, M., Sill, M., Graf, M., Moreno, N., Menck, K., Rohlmann, A., Melcher, V., Korbanka, S., Meyer Zu Hörste, G., Lautwein, T., Frühwald, M. C., Krebs, C. F., Holdhof, D., Schoof, M., Bleckmann, A., Missler, M., Dugas, M., Schüller, U., Jäger, N., … Kerl, K. (2021). An extracellular vesicle-related gene expression signature identifies high-risk patients in medulloblastoma. Neuro-oncology, 23(4), 586–598. https://doi.org/10.1093/neuonc/noaa254
Bülow, R. D., Dimitrov, D., Boor, P., & Saez-Rodriguez, J. (2021). How will artificial intelligence and bioinformatics change our understanding of IgA in the next decade?. Seminars in immunopathology, 10.1007/s00281-021-00847-y. Advance online publication. https://doi.org/10.1007/s00281-021-00847-y
Schefzik, R., Flesch, J., & Goncalves, A. (2021). Fast identification of differential distributions in single-cell RNA-sequencing data with waddR. Bioinformatics (Oxford, England), btab226. Advance online publication. https://doi.org/10.1093/bioinformatics/btab226
Woo, M. S., Ufer, F., Rothammer, N., Di Liberto, G., Binkle, L., Haferkamp, U., Sonner, J. K., Engler, J. B., Hornig, S., Bauer, S., Wagner, I., Egervari, K., Raber, J., Duvoisin, R. M., Pless, O., Merkler, D., & Friese, M. A. (2021). Neuronal metabotropic glutamate receptor 8 protects against neurodegeneration in CNS inflammation. The Journal of experimental medicine, 218(5), e20201290. https://doi.org/10.1084/jem.20201290
Weberpals, J., Becker, T., Davies, J., Schmich, F., Rüttinger, D., Theis, F. J., & Bauer-Mehren, A. (2021). Deep Learning-based Propensity Scores for Confounding Control in Comparative Effectiveness Research: A Large-scale, Real-world Data Study. Epidemiology (Cambridge, Mass.), 32(3), 378–388. https://doi.org/10.1097/EDE.0000000000001338
Tan, L., Fichtner, A. S., Bruni, E., Odak, I., Sandrock, I., Bubke, A., Borchers, A., Schultze-Florey, C., Koenecke, C., Förster, R., Jarek, M., von Kaisenberg, C., Schulz, A., Chu, X., Zhang, B., Li, Y., Panzer, U., Krebs, C. F., Ravens, S., & Prinz, I. (2021). A fetal wave of human type 3 effector γδ cells with restricted TCR diversity persists into adulthood. Science immunology, 6(58), eabf0125. https://doi.org/10.1126/sciimmunol.abf0125
Stutte, S., Ruf, J., Kugler, I., Ishikawa-Ankerhold, H., Parzefall, A., Marconi, P., Maeda, T., Kaisho, T., Krug, A., Popper, B., Lauterbach, H., Colonna, M., von Andrian, U., & Brocker, T. (2021). Type I interferon mediated induction of somatostatin leads to suppression of ghrelin and appetite thereby promoting viral immunity in mice. Brain, behavior, and immunity, S0889-1591(21)00176-8. Advance online publication. https://doi.org/10.1016/j.bbi.2021.04.018
Schröpfer, S., Vogt, I., Broggini, G., Dahl, A., Richter, K., Hanke, M. V., Flachowsky, H., & Peil, A. (2021). Transcriptional profile of AvrRpt2EA-mediated resistance and susceptibility response to Erwinia amylovora in apple. Scientific reports, 11(1), 8685. https://doi.org/10.1038/s41598-021-88032-x
Zheng, T., Ellinghaus, D., Juzenas, S., Cossais, F., Burmeister, G., Mayr, G., Jørgensen, I. F., Teder-Laving, M., Skogholt, A. H., Chen, S., Strege, P. R., Ito, G., Banasik, K., Becker, T., Bokelmann, F., Brunak, S., Buch, S., Clausnitzer, H., Datz, C., DBDS Consortium, … Franke, A. (2021). Genome-wide analysis of 944 133 individuals provides insights into the etiology of haemorrhoidal disease. Gut, gutjnl-2020-323868. Advance online publication. https://doi.org/10.1136/gutjnl-2020-323868
Argelaguet, R, Cuomo, ASE, Stegle, O, Marioni, JC. Computational principles and challenges in single-cell data integration. Nat Biotechnol. 2021; :. doi: 10.1038/s41587-021-00895-7. PubMed PMID:33941931 .
Hill, CA, Fernandez, DM, Giannarelli, C. Single cell analyses to understand the immune continuum in atherosclerosis. Atherosclerosis. 2021; :. doi: 10.1016/j.atherosclerosis.2021.04.003. PubMed PMID:33934886 .
Del Giudice, M, Peirone, S, Perrone, S, Priante, F, Varese, F, Tirtei, E et al.. Artificial Intelligence in Bulk and Single-Cell RNA-Sequencing Data to Foster Precision Oncology. Int J Mol Sci. 2021;22 (9):. doi: 10.3390/ijms22094563. PubMed PMID:33925407 .
Derakhshani, A, Rostami, Z, Safarpour, H, Shadbad, MA, Nourbakhsh, NS, Argentiero, A et al.. From Oncogenic Signaling Pathways to Single-Cell Sequencing of Immune Cells: Changing the Landscape of Cancer Immunotherapy. Molecules. 2021;26 (8):. doi: 10.3390/molecules26082278. PubMed PMID:33920054 PubMed Central PMC8071039.
Ma, SX, Lim, SB. Single-Cell RNA Sequencing in Parkinson’s Disease. Biomedicines. 2021;9 (4):. doi: 10.3390/biomedicines9040368. PubMed PMID:33916045 PubMed Central PMC8066089.
Search PubMedLi, X., Liao, Z., Deng, Z., Chen, N., & Zhao, L. (2021). Combining bulk and single-cell RNA-sequencing data to reveal gene expression pattern of chondrocytes in the osteoarthritic knee. Bioengineered, 12(1), 997–1007. https://doi.org/10.1080/21655979.2021.1903207
Van de Sande, D. V., Kopljar, I., Maaike, A., Teisman, A., Gallacher, D. J., Bart, L., Snyders, D. J., Leybaert, L., Lu, H. R., & Labro, A. J. (2021). The resting membrane potential of hSC-CM in a syncytium is more hyperpolarised than that of isolated cells. Channels (Austin, Tex.), 15(1), 239–252. https://doi.org/10.1080/19336950.2021.1871815
Tajti, G., Szanto, T. G., Csoti, A., Racz, G., Evaristo, C., Hajdu, P., & Panyi, G. (2021). Immunomagnetic separation is a suitable method for electrophysiology and ion channel pharmacology studies on T cells. Channels (Austin, Tex.), 15(1), 53–66. https://doi.org/10.1080/19336950.2020.1859753
Yu, C. I., Martinek, J., Wu, T. C., Kim, K. I., George, J., Ahmadzadeh, E., Maser, R., Marches, F., Metang, P., Authie, P., Oliveira, V., Wang, V. G., Chuang, J. H., Robson, P., Banchereau, J., & Palucka, K. (2021). Human KIT+ myeloid cells facilitate visceral metastasis by melanoma. The Journal of experimental medicine, 218(6), e20182163. https://doi.org/10.1084/jem.20182163
Loe, A., Francis, R., Seo, J., Du, L., Wang, Y., Kim, J. E., Hakim, S. W., Kim, J. E., He, H. H., Guo, H., & Kim, T. H. (2021). Uncovering the dosage-dependent roles of Arid1a in gastric tumorigenesis for combinatorial drug therapy. The Journal of experimental medicine, 218(6), e20200219. https://doi.org/10.1084/jem.20200219
Davis, F. M., Tsoi, L. C., Melvin, W. J., denDekker, A., Wasikowski, R., Joshi, A. D., Wolf, S., Obi, A. T., Billi, A. C., Xing, X., Audu, C., Moore, B. B., Kunkel, S. L., Daugherty, A., Lu, H. S., Gudjonsson, J. E., & Gallagher, K. A. (2021). Inhibition of macrophage histone demethylase JMJD3 protects against abdominal aortic aneurysms. The Journal of experimental medicine, 218(6), e20201839. https://doi.org/10.1084/jem.20201839