Publications

Narayanan, A, Blanco-Carmona, E, Demirdizen, E, Sun, X, Herold-Mende, C, Schlesner, M et al.. Nuclei Isolation from Fresh Frozen Brain Tumors for Single-Nucleus RNA-seq and ATAC-seq. J Vis Exp. 2020; (162):. doi: 10.3791/61542. PubMed PMID:32925882 .

Bonnay, F, Veloso, A, Steinmann, V, Köcher, T, Abdusselamoglu, MD, Bajaj, S et al.. Oxidative Metabolism Drives Immortalization of Neural Stem Cells during Tumorigenesis. Cell. 2020; :. doi: 10.1016/j.cell.2020.07.039. PubMed PMID:32916131 .

Rajewsky, N, Almouzni, G, Gorski, SA, Aerts, S, Amit, I, Bertero, MG et al.. LifeTime and improving European healthcare through cell-based interceptive medicine. Nature. 2020; :. doi: 10.1038/s41586-020-2715-9. PubMed PMID:32894860 .

He, Z, Brazovskaja, A, Ebert, S, Camp, JG, Treutlein, B. CSS: cluster similarity spectrum integration of single-cell genomics data. Genome Biol. 2020;21 (1):224. doi: 10.1186/s13059-020-02147-4. PubMed PMID:32867824 PubMed Central PMC7460789.

Fiorentino, J, Torres-Padilla, ME, Scialdone, A. Measuring and Modeling Single-Cell Heterogeneity and Fate Decision in Mouse Embryos. Annu. Rev. Genet. 2020; :. doi: 10.1146/annurev-genet-021920-110200. PubMed PMID:32867543 .

Noske, A, Ammann, JU, Wagner, DC, Denkert, C, Lebeau, A, Sinn, P et al.. A multicentre analytical comparison study of inter-reader and inter-assay agreement of four programmed death-ligand 1 (PD-L1) immunohistochemistry assays for scoring in triple-negative breast cancer. Histopathology. 2020; :. doi: 10.1111/his.14254. PubMed PMID:32936950 .

Schueder, F, Lara-Gutiérrez, J, Haas, D, Beckwith, KS, Yin, P, Ellenberg, J et al.. Super-resolution spatial proximity detection with proximity-PAINT. Angew. Chem. Int. Ed. Engl. 2020; :. doi: 10.1002/anie.202009031. PubMed PMID:32936507 .

Plath, M, Gass, J, Hlevnjak, M, Li, Q, Feng, B, Hostench, XP et al.. Unraveling most abundant mutational signatures in head and neck cancer. Int. J. Cancer. 2020; :. doi: 10.1002/ijc.33297. PubMed PMID:32930393 .

Brockman, JM, Su, H, Blanchard, AT, Duan, Y, Meyer, T, Quach, ME et al.. Live-cell super-resolved PAINT imaging of piconewton cellular traction forces. Nat. Methods. 2020; :. doi: 10.1038/s41592-020-0929-2. PubMed PMID:32929270 .

Kouwenhoven, WM, Fortin, G, Penttinen, AM, Florence, C, Delignat-Lavaud, B, Bourque, MJ et al.. VGLUT2 EXPRESSION IN DOPAMINE NEURONS CONTRIBUTES TO POST-LESIONAL STRIATAL REINNERVATION. J. Neurosci. 2020; :. doi: 10.1523/JNEUROSCI.0823-20.2020. PubMed PMID:32928885 .

Fan, J, Slowikowski, K, Zhang, F. Single-cell transcriptomics in cancer: computational challenges and opportunities. Exp. Mol. Med. 2020; :. doi: 10.1038/s12276-020-0422-0. PubMed PMID:32929226 .

Lee, J, Hyeon, DY, Hwang, D. Single-cell multiomics: technologies and data analysis methods. Exp. Mol. Med. 2020; :. doi: 10.1038/s12276-020-0420-2. PubMed PMID:32929225 .

Ando, Y, Kwon, AT, Shin, JW. An era of single-cell genomics consortia. Exp. Mol. Med. 2020; :. doi: 10.1038/s12276-020-0409-x. PubMed PMID:32929222 .

Kashima, Y, Sakamoto, Y, Kaneko, K, Seki, M, Suzuki, Y, Suzuki, A et al.. Single-cell sequencing techniques from individual to multiomics analyses. Exp. Mol. Med. 2020; :. doi: 10.1038/s12276-020-00499-2. PubMed PMID:32929221 .

Estermann, MA, Smith, CA. Applying Single-Cell Analysis to Gonadogenesis and DSDs (Disorders/Differences of Sex Development). Int J Mol Sci. 2020;21 (18):. doi: 10.3390/ijms21186614. PubMed PMID:32927658 .

Brann, DH, Tsukahara, T, Weinreb, C, Lipovsek, M, Van den Berge, K, Gong, B et al.. Non-neuronal expression of SARS-CoV-2 entry genes in the olfactory system suggests mechanisms underlying COVID-19-associated anosmia. Sci Adv. 2020;6 (31):. doi: 10.1126/sciadv.abc5801. PubMed PMID:32937591 .

Adams, TS, Schupp, JC, Poli, S, Ayaub, EA, Neumark, N, Ahangari, F et al.. Single-cell RNA-seq reveals ectopic and aberrant lung-resident cell populations in idiopathic pulmonary fibrosis. Sci Adv. 2020;6 (28):. doi: 10.1126/sciadv.aba1983. PubMed PMID:32937511 .

Habermann, AC, Gutierrez, AJ, Bui, LT, Yahn, SL, Winters, NI, Calvi, CL et al.. Single-cell RNA sequencing reveals profibrotic roles of distinct epithelial and mesenchymal lineages in pulmonary fibrosis. Sci Adv. 2020;6 (28):. doi: 10.1126/sciadv.aba1972. PubMed PMID:32937510 .

Ochiai, H, Hayashi, T, Umeda, M, Yoshimura, M, Harada, A, Shimizu, Y et al.. Genome-wide kinetic properties of transcriptional bursting in mouse embryonic stem cells. Sci Adv. 2020;6 (25):. doi: 10.1126/sciadv.aaz6699. PubMed PMID:32937490 .

Rath, JA, Bajwa, G, Carreres, B, Hoyer, E, Gruber, I, Martínez-Paniagua, MA et al.. Single-cell transcriptomics identifies multiple pathways underlying antitumor function of TCR- and CD8αβ-engineered human CD4⁺ T cells. Sci Adv. 2020;6 (27):. doi: 10.1126/sciadv.aaz7809. PubMed PMID:32937466 .