Publications

Wyler, E, Franke, V, Menegatti, J, Kocks, C, Boltengagen, A, Praktiknjo, S et al.. Single-cell RNA-sequencing of herpes simplex virus 1-infected cells connects NRF2 activation to an antiviral program. Nat Commun. 2019;10 (1):4878. doi: 10.1038/s41467-019-12894-z. PubMed PMID:31653857 PubMed Central PMC6814756.

Günther, P, Schultze, JL. Mind the Map: Technology Shapes the Myeloid Cell Space. Front Immunol. 2019;10 :2287. doi: 10.3389/fimmu.2019.02287. PubMed PMID:31636632 PubMed Central PMC6787770.

Kanton, S, Boyle, MJ, He, Z, Santel, M, Weigert, A, Sanchís-Calleja, F et al.. Organoid single-cell genomic atlas uncovers human-specific features of brain development. Nature. 2019;574 (7778):418-422. doi: 10.1038/s41586-019-1654-9. PubMed PMID:31619793 .

Vieth, B, Parekh, S, Ziegenhain, C, Enard, W, Hellmann, I. A systematic evaluation of single cell RNA-seq analysis pipelines. Nat Commun. 2019;10 (1):4667. doi: 10.1038/s41467-019-12266-7. PubMed PMID:31604912 PubMed Central PMC6789098.

Camp, JG, Platt, R, Treutlein, B. Mapping human cell phenotypes to genotypes with single-cell genomics. Science. 2019;365 (6460):1401-1405. doi: 10.1126/science.aax6648. PubMed PMID:31604266 .

Freund, C, Höfer, T. A Missing Switch in Peptide Exchange for MHC Class II Molecules. Front Immunol. 2019;10 :2513. doi: 10.3389/fimmu.2019.02513. PubMed PMID:31708929 PubMed Central PMC6820466.

Iniesta, A, Bonev, B, Curvale, C, Legré, R, Gay, A. Outcomes of ulnar shortening osteotomy using a new compression plate. Hand Surg Rehabil. 2019; :. doi: 10.1016/j.hansur.2019.09.009. PubMed PMID:31706028 .

Jamy, M, Foster, R, Barbera, P, Czech, L, Kozlov, A, Stamatakis, A et al.. Long-read metabarcoding of the eukaryotic rDNA operon to phylogenetically and taxonomically resolve environmental diversity. Mol Ecol Resour. 2019; :. doi: 10.1111/1755-0998.13117. PubMed PMID:31705734 .

Deán-Ben, XL, Özbek, A, López-Schier, H, Razansky, D. Acoustic Scattering Mediated Single Detector Optoacoustic Tomography. Phys. Rev. Lett. 2019;123 (17):174301. doi: 10.1103/PhysRevLett.123.174301. PubMed PMID:31702258 .

Guthmann, M, Burton, A, Torres-Padilla, ME. Expression and phase separation potential of heterochromatin proteins during early mouse development. EMBO Rep. 2019; :e47952. doi: 10.15252/embr.201947952. PubMed PMID:31701657 .

Qi, Z, Barrett, T, Parikh, AS, Tirosh, I, Puram, SV. Single-cell sequencing and its applications in head and neck cancer. Oral Oncol. 2019;99 :104441. doi: 10.1016/j.oraloncology.2019.104441. PubMed PMID:31689639 .

Rossi, E, Zamarchi, R. Single-Cell Analysis of Circulating Tumor Cells: How Far Have We Come in the -Omics Era? Front Genet. 2019;10 :958. doi: 10.3389/fgene.2019.00958. PubMed PMID:31681412 PubMed Central PMC6811661.

Fattore, L, Ruggiero, CF, Liguoro, D, Mancini, R, Ciliberto, G. Single cell analysis to dissect molecular heterogeneity and disease evolution in metastatic melanoma. Cell Death Dis. 2019;10 (11):827. doi: 10.1038/s41419-019-2048-5. PubMed PMID:31672982 PubMed Central PMC6823362.

Dobie, R, Henderson, NC. Unravelling fibrosis using single-cell transcriptomics. Curr Opin Pharmacol. 2019;49 :71-75. doi: 10.1016/j.coph.2019.09.004. PubMed PMID:31670054 .

Mironova, V, Xu, J. A single-cell view of tissue regeneration in plants. Curr. Opin. Plant Biol. 2019;52 :149-154. doi: 10.1016/j.pbi.2019.09.003. PubMed PMID:31655397 .

Co, M, Hickey, SL, Kulkarni, A, Harper, M, Konopka, G. Cortical Foxp2 Supports Behavioral Flexibility and Developmental Dopamine D1 Receptor Expression. Cereb. Cortex. 2019; :. doi: 10.1093/cercor/bhz209. PubMed PMID:31711176 .

Gao, L, Nath, SC, Jiao, X, Zhou, R, Nishikawa, S, Krawetz, R et al.. Post-Passage rock inhibition induces cytoskeletal aberrations and apoptosis in Human embryonic stem cells. Stem Cell Res. 2019;41 :101641. doi: 10.1016/j.scr.2019.101641. PubMed PMID:31710913 .

Sinjab, F, Elsheikha, HM, Dooley, M, Notingher, I. Induction and measurement of the early stage of a host-parasite interaction using a combined optical trapping and Raman micro-spectroscopy system. J Biophotonics. 2019; :e201960065. doi: 10.1002/jbio.201960065. PubMed PMID:31710774 .

Stossi, F, Dandekar, RD, Johnson, H, Lavere, P, Foulds, CE, Mancini, MG et al.. Tributyltin chloride (TBT) induces RXRA down-regulation and lipid accumulation in human liver cells. PLoS ONE. 2019;14 (11):e0224405. doi: 10.1371/journal.pone.0224405. PubMed PMID:31710612 .

Lee, JA, Riazi, S, Nemati, S, Bazurto, JV, Vasdekis, AE, Ridenhour, BJ et al.. Microbial phenotypic heterogeneity in response to a metabolic toxin: Continuous, dynamically shifting distribution of formaldehyde tolerance in Methylobacterium extorquens populations. PLoS Genet. 2019;15 (11):e1008458. doi: 10.1371/journal.pgen.1008458. PubMed PMID:31710603 .