SCOG Virtual Events

Virtual Lecture Series

‘Recent Advances in Single Cell Omics’: Biweekly presentations about current single cell research, on Fridays at 9.30 am (CEST)

Please register in order to receive information on how to join the webinar. If you would like to give a talk, please apply by completing the form on our website. 


‘Single Cell Genomics meets Data Science’: Sep 12-13, Munich.

‘Recent Advances in Single Cell Epigenomics 2022’: Nov 16-18, Überherrn/Saarlouis.
The places for the meeting and the hackathon are limited. Please complete the registration application. Notification of acceptance will be announced after the application deadline


The lab of Christian Krebs is looking for a postdoc interested in the project “Targeting tissue-resident memory T cell in
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Barbara Treutlein (SCOG SC member), Prisca Liberali (SCOG partner) and Fabian Theis (SCOG founding member and coordinator) have been accepted
Read more

singlecellomics Retweeted
@FriedlanderLab: Now our new method agoTRIBE to experimentally map microRNA targets in single cells is available as pre-print! @scilifelab
singlecellomics Retweeted
@saezlab: Our very much extended and revised multiomics single cell (RNA/ATAC seq) and spatial atlas of human myocardial infarction 🫀✨🚀 is out now @Nature! 🥳

Collaborative effort w/ @rkramann, @vanvanka123, & H Milting’s labs
singlecellomics Retweeted
@hpke1980: How could I be more proud… Our single cell isolation and proteomics method, the Deep Visual Proteomics is the current cover of Nature Biotecnology. What a day! @labs_mann @SCTHungary @MundAndreas @fabiancoscia @AndrasKriston @spreka007 @Prof_Lundberg
singlecellomics Retweeted
@ClementCochain: Our work on single-cell/CITE-seq analysis of monocyte-derived macrophages in experimental myocardial infarction is out in Cardiovascular Research (, led by Giuseppe Rizzo and in collaboration with @AE_Saliba @ZerneckeLab and others. 1/n
singlecellomics Retweeted
@BIMSB_MDC: The abstract submission deadline for the Berlin Summer Meeting 2022 has been extended to August 21:
Submit your abstract for consideration for a full talk, or apply with just the title and a brief statement to give a short science pitch!
singlecellomics Retweeted
@KuppeChristoph: We are thrilled to see our new paper out @Nature! ( We generated a spatially resolved single-cell multi-omics atlas of human myocardial infarction from 23 patients, spanning multiple tissue regions, including over 200k nuclei and 28 spatial samples. 1/n
singlecellomics Retweeted
@coletrapnell: Our preprint on deep phenotyping of genetic perturbations of zebrafish embryos with single-cell RNA sequencing is now online. Led by @LSaund11 and @SRsrivatsan, with David Kimelman, @CeciliaMoens, @RaibleLab and @JShendure
singlecellomics Retweeted
@HaniffaLab: New preprint alert! 📢🥳

Using multiomic profiling of #SingleCell data we integrated and analysed ~180k cells from first trimester human yolk sac (YS)

Our investigations recovered cells from the contents, membrane & vitelline duct [see vid below]

Here’s what we learnt [1/9]👇🏾


Single cell genomics is revolutionizing biology and medicine, combining the advantages of bulk sequencing techniques and microscopic analysis of single cells.

Rapid technological advances now allow the profiling of genomes, transcriptomes and epigenomes at an unprecedented level of resolution. To harness the full potential of these developments new computational methods specifically tailored towards the analysis of single cell omics data are essential. Integrating efforts in all research areas involved will enhance the translation of single cell sequencing techniques to the clinic. The network Single Cell Omics Germany (SCOG) brings together national researchers using and developing single cell technologies to generate insights into biological systems. Its mission is to provide a collaborative platform for the exchange of both computational and experimental methods and expertise, thereby strengthening single cell research in Germany. Connecting the German single cell community with relevant international initiatives (such as HCA and IHEC), the network will help to address biomedical questions and foster translational research.


Collaborative platform for
the exchange of expertise


Single cell conferences and
hackathons for the community


Connecting researchers in Germany
with international initiatives

The Network

Partners and Members

More than 100 active Partners across Germany plus more than 140 Members worldwide.

Find out more.

Management Team


Fabian Theis (founding member, coordinator)

Anna Sacher


Nikolaus Rajewsky (founding member)

Marco Uhrig


Jörn Walter (founding member)

Nina Gasparoni

Steering Committee

Angelika Eggert, Charité, Berlin

Christine Falk, MHH, Hannover

Eileen Furlong, EMBL, Heidelberg

Nikolaus Rajewsky, BIMSB/MDC, Berlin

Joachim Schultze, DZNE, Bonn

Fabian Theis, HMGU, Munich

Maria Elena Torres-Padilla, HMGU, Munich

Barbara Treutlein, MPI, Leipzig / ETH, Zürich

Jörn WalterUSAAR, Saarbrücken


Get in Touch

SCOG Management Team

     Helmholtz Zentrum München

     MDC Berlin

     Saarland University

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