SCOG Virtual Events
Virtual Lecture Series
‘Recent Advances in Single Cell Omics’: Biweekly presentations about current single cell research, on Fridays at 9.30 am (CEST)
Please register in order to receive information on how to join the webinar. If you are a SCOG partner or member and would like to give a talk, please apply by completing the form on our website.
Virtual Workshop
‘Spatial transcriptomics data analysis in Python’: May 23-24, 2022 , 2 – 5 pm (CEST).
The workshop will cover the analysis of spatial transcriptomics data in Python, with tools like squidpy, node-centric expression models (ncem) as well as deconvolution (cell2location) and registration methods (eggplant). Basic python and scanpy knowledge required. Please register in order to receive information on how to join the event.
News
Big thanks to all the speakers!
Recordings available on YouTube soon. https://t.co/wEvpOeH3u8
Spatial Transcriptomics-correlated Electron Microscopy https://t.co/a1nuwbT54J
If you are not convinced, yet 😉, of how amazing induced pluripotent stem cells are, have a look at our latest work on human iPSC differentiation to myeloid cells now out in @NatureComms. @sangerinstitute @OpenTargets #singlecell #HumanCellAtlas https://t.co/piAx3vUQT9
Join us if you like to learn more about Eggplant and Cell2location: https://t.co/H5Eo1IXuq6
@fabian_theis @HelmholtzMunich https://t.co/5gBqcTVaH3
Mission
Single cell genomics is revolutionizing biology and medicine, combining the advantages of bulk sequencing techniques and microscopic analysis of single cells.
Rapid technological advances now allow the profiling of genomes, transcriptomes and epigenomes at an unprecedented level of resolution. To harness the full potential of these developments new computational methods specifically tailored towards the analysis of single cell omics data are essential. Integrating efforts in all research areas involved will enhance the translation of single cell sequencing techniques to the clinic. The network Single Cell Omics Germany (SCOG) brings together national researchers using and developing single cell technologies to generate insights into biological systems. Its mission is to provide a collaborative platform for the exchange of both computational and experimental methods and expertise, thereby strengthening single cell research in Germany. Connecting the German single cell community with relevant international initiatives (such as HCA and IHEC), the network will help to address biomedical questions and foster translational research.
Exchange
Collaborative platform for
the exchange of expertise
Events
Single cell conferences and
hackathons for the community
Connect
Connecting researchers in Germany
with international initiatives
The Network
Partners and Members
More than 100 active Partners across Germany plus more than 140 Members worldwide.
Management Team
Munich
Fabian Theis (founding member, coordinator)
Anna Sacher
Berlin
Nikolaus Rajewsky (founding member)
Marco Uhrig
Saarbrücken
Jörn Walter (founding member)
Nina Gasparoni
Steering Committee
Angelika Eggert, Charité, Berlin
Christine Falk, MHH, Hannover
Eileen Furlong, EMBL, Heidelberg
Nikolaus Rajewsky, BIMSB/MDC, Berlin
Joachim Schultze, DZNE, Bonn
Fabian Theis, HMGU, Munich
Maria Elena Torres-Padilla, HMGU, Munich
Barbara Treutlein, MPI, Leipzig / ETH, Zürich
Jörn Walter, USAAR, Saarbrücken
Funding
Get in Touch
SCOG Management Team
Helmholtz Zentrum München
MDC Berlin
Saarland University