SCOG Virtual Events

Virtual Lecture Series

‘Recent Advances in Single Cell Omics’: Biweekly presentations about current single cell research, on Fridays at 9.30 am (CEST)

Please register in order to receive information on how to join the webinar. If you are a SCOG partner or member and would like to give a talk, please apply by completing the form on our website. 

Virtual Workshop

‘Sfaira: Using curated public data in an instant and increasing usability of your own data’: February 14 – 15 2022, 2 – 6 pm (CET).

The workshop will cover the use of precurated data for re-analysis or model fitting and curation of new data. Basic python and scanpy knowledge required. Please register in order to receive information on how to join the event.

News

The group of Marc Beyer at the German Center for Neurodegenerative Diseases (DZNE) in Bonn is recruiting for a Postdoctoral
Read more
The ‘Data Science for Vision Research’ group at the Institute for Ophthalmic Research at the University of Tübingen is offering
Read more

singlecellomics Retweeted
@slacadie: Excited to finally see this out. Thanks to the whole team, especially ⁦@McgarveyAlison⁩ ⁦@WolfgangKopp3⁩ ⁦@Dusa_DV⁩ and ⁦@uwe_ohler⁩. ⁦⁩ ⁩ ⁦@BIMSB_MDC⁩ ⁦⁦⁩ ⁦@helmholtz_en⁩ ⁦⁦@StiftungCharite⁩ https://t.co/ZNUPYE6RW8
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singlecellomics Retweeted
@BrittaVelten: MEFISTO is out in Nature Methods – a framework for dimension reduction and integration of multi-modal omics data with temporal or spatial resolution. Paper at https://t.co/bdbfE0S9wL, highlights in the thread below. (1/7)
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singlecellomics Retweeted
@BrunetLab: Excited to report that our paper on single-cell based ‘aging clocks’ for regenerative regions of the brain is on bioRxiv!

HUGE congrats to Matt @MatttBuckley and Eric @EricDSun and to our fantastic collaborators at Baylor, UCLA, and Stanford! 🎉

A 🧵

https://t.co/uWosVkG445 https://t.co/E5VETfa773
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singlecellomics Retweeted
@bayraktar_lab: finally out @NatureBiotech: cell2location tool for integration of single cell & spatial transcriptomics! Tons of new work showing that we can resolve fine cell types in spatial RNAseq & comprehensively map tissues. With @OliverStegle, proud of @vitaliikl👇https://t.co/vBTdZykbH6 https://t.co/lBGCc3Uvjn
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singlecellomics Retweeted
@MDLuecken: What a great surprise to come back to after Christmas holidays to find our paper on benchmarking atlas-level single-cell data integration methods has finally been published. https://t.co/qAbFF8j7Fi . A Tweetorial:
1/N
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singlecellomics Retweeted
@KC_DC_01: Our #LiverCellAtlas with @MartinGuilliams is out now @CellCellPress. Here we used single cell + nuclei RNA-seq, CITE-seq & spatial transcriptomics/proteomics to identify & localise immune & structural cells of the healthy & obese human & murine liver https://t.co/jzBThJYXBp 1/12
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singlecellomics Retweeted
@S_Grosswendt: We have been awarded an #ERCStG! Many thanks to @ERC_Research, the panel & reviewers, and great colleagues for their valuable support @berlinnovation/@ChariteBerlin/@BIMSB_MDC/@MDC_Berlin
The grant will fund our single-cell research on cell interactions and their communication.
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singlecellomics Retweeted
@BIMSB_MDC: OPEN POSITION @BIMSB_MDC: We are expanding and looking for 2 group leaders focusing on #spatialtranscriptomics, #organoids, #cellengineering or #RNAtherapeutics. More info https://t.co/cmmZKbKdLy @MDC_Berlin https://t.co/N5C6ZwOqdo
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Mission

Single cell genomics is revolutionizing biology and medicine, combining the advantages of bulk sequencing techniques and microscopic analysis of single cells.

Rapid technological advances now allow the profiling of genomes, transcriptomes and epigenomes at an unprecedented level of resolution. To harness the full potential of these developments new computational methods specifically tailored towards the analysis of single cell omics data are essential. Integrating efforts in all research areas involved will enhance the translation of single cell sequencing techniques to the clinic. The network Single Cell Omics Germany (SCOG) brings together national researchers using and developing single cell technologies to generate insights into biological systems. Its mission is to provide a collaborative platform for the exchange of both computational and experimental methods and expertise, thereby strengthening single cell research in Germany. Connecting the German single cell community with relevant international initiatives (such as HCA and IHEC), the network will help to address biomedical questions and foster translational research.

Exchange

Collaborative platform for
the exchange of expertise

Events

Single cell conferences and
hackathons for the community

Connect

Connecting researchers in Germany
with international initiatives

The Network

Partners and Members

More than 100 active Partners across Germany plus more than 140 Members worldwide.

Find out more.

Management Team

Munich

Fabian Theis (founding member, coordinator)

Anna Sacher

Berlin

Nikolaus Rajewsky (founding member)

Marco Uhrig

Saarbrücken

Jörn Walter (founding member)

Nina Gasparoni

Steering Committee

Angelika Eggert, Charité, Berlin

Christine Falk, MHH, Hannover

Eileen Furlong, EMBL, Heidelberg

Nikolaus Rajewsky, BIMSB/MDC, Berlin

Joachim Schultze, DZNE, Bonn

Fabian Theis, HMGU, Munich

Maria Elena Torres-Padilla, HMGU, Munich

Barbara Treutlein, MPI, Leipzig / ETH, Zürich

Jörn WalterUSAAR, Saarbrücken

Funding

Get in Touch

SCOG Management Team

     Helmholtz Zentrum München

     MDC Berlin

     Saarland University

Contact Us